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Materials:
Note: amounts denoted by x/y are for QIAGEN-tip 100 / QIAGEN-tip
500.
Methods:
- Chill Buffer P3 on ice (also P1?).
- For each bacterial strain, use appropriate amount of culture
according to above table.
- Harvest the bacterial cells by centrifugation at 6000
g
for 15 min
. Remove all traces of supernatant by inverting
the open centrifuge tube until all medium has been drained.
- Resuspend the bacterial pellet in 4/10 ml of buffer P1. Vortex
until there are no more clumps. Pipet the contents of the third tube
into each of the other two tubes.
- Add 4/10 ml of Buffer P2, mix gently but thoroughly by inverting 4-6
times, and incubate at room temprerature for 5 min. Do not vortex.
Do not allow lysis reaction to proceed for more than 5 min. Close
Buffer P2 bottle immediately.
- Add 4/10 ml of chilled Buffer P3, mix immediately but gently by
inverting 4-6 times, and incubate on ice for 15/20 min.
- Mix the sample again, before loading the centrifuge. Centrifuge
at
for 30 min
. Remove supernatant
containing plasmid DNA promptly. After centrifugation, the
supernatant should be clear.
- Re-centrifuge the supernatant at
for 15
min
. Remove supernatant containing plasmid DNA promptly.
- Equilibrate a QIAGEN-tip 100/500 by applying 4/10 ml Buffer QBT, and
allow the column to empty by gravity flow.
- Apply the supernatant of plasmid DNA to the QIAGEN-tip and allow
it to enter the resin by gravity flow. The supernatant should be
loaded onto the QIAGEN-tip promptly. If it becomes cloudy, it must be
recentrifuged.
- Wash the QIAGEN-tip with
ml Buffer QC. Allow
Buffer QC to move through the QIAGEN-tip by gravity flow.
- Elute DNA with 5/15 ml Buffer QF. Collect the eluate in a 10 ml or
30 ml tube. Do not use polycarbonate tubes because they are not
resistant to the alcohol used in subsequent steps.
- Precipitate DNA by adding 3.5/10.5 (0.7 volumes) room temperature
isopropanol to the eluted DNA. Mix and centrifuge immediately at
for 30 min
. Carefully decant the
supernatant. Mark the outside of the tube before centrifugation to
locate pellet more easily.
- Wash DNA pellet with 2/5 ml of room temperature
ethanol,
and centrifuge at
for 10 min. Carefully decant
the supernatant without disturbing the pellet.
- Air-dry the pellet for 5-10 min, and redissolve the DNA in a
suitable volume of buffer (e.g. TE, pH 8.0, or 10 mM Tris-Cl, pH 8.5).
Redissolve the DNA pellet by rinsing the walls to recover all the DNA.
Do not pipet the DNA up and down, to avoid sheering.
Next: Protocol: Making Plates
Up: Protocol: Prep to Extract
Previous: Qiagen-tip 20 Miniprep
Ron Weiss
Wed Feb 10 15:48:08 EST 1999