| |
Bambang S Adiwijaya
Ph.D. 2006
Chemical Engineering
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Simulation and Optimization Tools to Study Design Principles of Biological Networks
|
| |
Alexander Akhiezer
Ph.D. 2002
Chemistry
|
Theoretical and Experimental Studies of Small Molecule Ligands
|
| |
Sahar Alkhairy
M.Eng. 2016
Course 6
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Comprehensive single and paired drug target identification in healthy and disease models of NF-kB pathway
|
| |
Michael D Altman
Ph.D. 2006
Chemistry
|
Computational Ligand Design and Analysis in Protein Complexes Using Inverse Methods, Combinatorial Search, and Accurate Solvation Modeling
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| |
Josh Apgar
Ph.D. 2009
Biological Engingeering
|
Experiment Design for Systems Biology
|
| |
Kathryn Armstrong
Ph.D. 2007
Biological Engingeering
|
Computational Structure-based Modeling and Analysis with Application to Rational and Evolutionary Molecular Engineering
|
| |
Neha Bahl
Ph.D.
Singapore-MIT Alliance
|
|
| |
Jay Bardhan
Ph.D. 2006
Electrical Engineering and Computer Science
|
Efficient Numerical Algorithms for Surface Formulations of Mathematical Models for Biomolecule Analysis and Design
|
| |
Mark Bathe
Ph.D. 2004
Mechanical Engineering
|
Inverse Monte Carlo simulation of biomolecular conformation and coarse-grained molecular modeling of chondroitin sulfate conformation, titration, and osmotic pressure
|
| |
Caitlin Bever
Ph.D. 2008
Biological Engingeering
|
Selecting high-confidence predictions from ordinary differential equation models of biological networks
|
| |
Jason Biddle
Ph.D.2010
Computation for Design and Optimization
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Methods and Applications in Computational Protein Design
|
| |
Brian Bonk
Ph.D. 2018
Biological Engineering
|
Novel applications and methods for the computer-aided understanding and design of enzyme activity
|
| |
Justin A Caravella
Ph.D. 2002
Chemistry
|
Electrostatic and Packing in Biomolecules: Accounting for Conformational Change in Protein Folding and Binding
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| |
Lillian T Chong
B.S. 1996
|
|
| |
Jesse Cochrane
Technical Assistant
|
|
| |
Justin Cohen
UROP
|
|
| |
Yuanyuan Cui
January 2013
Computational and Systems Biology
|
Computational Modeling Techniques for Biological Network Productivity Increases: Optimization and Rate-limiting Reaction Detection
|
| |
David C Flowers
Ph.D. 2018
Biological Engineering
|
Computational modeling of knowledge and uncertainty in systems biology for drug target identification and protein engineering
|
| |
Filipe Gracio
MIT Portugal Program
|
|
| |
David F Green
Ph.D. 2002
Chemistry
|
Optimization of Electrostatic Binding Free Energy: Application to the Analysis and Design of Ligand Binding in Protein Complexes
|
| |
Sarah "Sally" Guthrie
UROP, Course 6-7
|
|
| |
David R Hagen
Ph.D. 2014
Biological Engineering
|
|
| |
Bucong Han
Singapore-MIT Alliance
|
|
| |
Karl JM Hanf
Ph.D. 2002
Physics
|
Protein Design with Hierarchical Treatment of Solvation and Electrostatics
|
| |
Zachary S Hendsch
Ph.D. 2001
Chemistry
|
Continuum Electrostatic Calculations of Biological Macromolecules
|
| |
Andrew D. Horning
Ph.D. 2015
Chemistry
|
A Computational Approach to Spectroscopy of Molecular Systems: Modeling, Prediction, and Design
|
| |
Lu Huang
Singapore-MIT Alliance
|
|
| |
David J Huggins
Postdoctoral Researcher
|
|
| |
Cristina Jarque Uribe
Postdoctoral Researcher
|
|
| |
Brian A Joughin
Ph.D. 2007
Biology
|
Novel Methods in Computational Analysis and Design of Protein-Protein Interactions: Applications to Phosphoregulated Interactions
|
| |
Dan Kamei
Postdoctoral Researcher
|
|
| |
Erik Kangas
Ph.D. 2000
Physics
|
Optimizing Molecular Electrostatic Interactions: Binding Affinity and Specificity
|
| |
Amy Keating
Postdoctoral Researcher
|
|
| |
Bo Kim
Ph.D. 2010
Electrical Engineering and
Computer Science
|
Robust Network Calibration and Therapy Design in Systems Biology
|
| |
Philip Mjong-Hyon S Kim
Ph.D. 2003
Chemistry
|
Understanding Subsystems in Biology through Dimensionality Reduction, Graph Partitioning and Analytical Modeling
|
| |
S Roy Kimura
Postdoctoral Researcher
|
Specificity in Catalytic Antibodies
|
| |
Bracken M King
Ph.D. 2010
Biological Engingeering
|
Analysis of Biological and Chemical Systems Using Information Theoretic Approximations
|
| |
Gil Kwak
M.Sc. 2011
Computation for Design and Optimization
|
|
| |
Lee-Peng Lee
Ph.D. 1999
|
Optimization of Electrostatic Binding Free Energy: Application to Barnase and Barstar
|
| |
Peter Lee
Technical Assistant
|
|
| |
Shaun M Lippow
Ph.D. 2007
Chemical Engineering
|
Computational Analysis, Design, and Experimental Validation of Antibody Binding Affinity Improvements Beyond In Vivo Maturation
|
| |
Yujing Liu
Singapore-MIT Alliance
|
|
| |
Michael de la Maza
B.S.
|
|
| |
Geronimo Mirano
UROP, Course 6-7
|
|
| |
Robert L Murray
M.Sc. 1996
|
Continuum Electrostatic Analysis of DNA Bending
|
| |
Adrian Orozco
SuperUROP / Course 6
|
|
| |
Ishan S Patel
Ph.D. 2015
Chemistry
|
Large scale simulation and analysis to understand enzymatic chemical mechanisms
|
| |
Nirmala Paudel
Biological Engineering
|
|
| |
Mala L Radhakrishnan
Ph.D. 2007
Chemistry
|
Tackling the Bigger Picture in Computational Drug Design: Theory, Methods, and Application to HIV-1 Protease and Erythropoietin Systems
|
| |
Devan Raghunathan
Postdoc 2012
Postdoctoral Researcher, Singapore-MIT Alliance
|
|
| |
Pradeep A Ravindranath
Singapore-MIT Alliance
Singapore-MIT Alliance
|
|
| |
Sudipta Samanta
Postdoctoral Researcher
Postdoctoral Researcher
|
|
| |
Natasha Seelam
Ph.D. 2021
Chemical Engineering
|
Computational approaches to understand the atomistic drivers of enzyme catalysis
|
| |
Alessandro Senes
Postdoctoral Researcher
|
|
| |
Jason Sharma
M.Eng. 2002
|
Developement of Self-Learning Algorithms for Cancer Detection
|
| |
Yang Shen
Postdoc 2011
Postdoctoral Researcher
|
|
| |
Brian Woody Sherman
Ph.D. 2004
Chemistry
|
Biomolecular Ligand Design: Enhancing Binding Affinity and Specificity Utilizing Electrostatic Charge Optimization and Packing Techniques
|
| |
Kevin Shi
Ph.D. 2019
Biological Engineering
|
Modeling and controlling uncertainty in multi-level biological systems
|
| |
Nate Silver
Ph.D. Ph.D. 2011
Chemistry
|
Ensemble Methods in Computational Protein and Ligand Design: Applications to the Fcr Immunoglobulin, HIV-1 Protease, and Ketol-acid Reductoisomerase Systems
|
| |
Eric J Simon
Ph.D. 1996
Harvard
|
A Molecular Dynamics Study of a Mutation in a Bacteriophage 434 Operator/Repressor Complex
|
| |
Charles V Sindelar
B.S. 1994
Technical Assistant
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|
| |
Christopher D Snow
B.S. 2001
|
|
| |
Shari Spector
Postdoctoral Researcher
|
|
| |
Raja R Srinivas
Ph.D. 2017
Biological Engineering
|
Computational engineering of small molecules to treat infectious diseases
|
| |
Kelly M Thayer
Postdoctoral Researcher
|
|
| |
Jared E Toettcher
Ph.D. 2009
Biological Engingeering
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Relating topology and dynamics in cell signaling networks
|
| |
Tina Toni
Postdoc 2012
Wellcome Trust-MIT Postdoctoral Fellow
|
|
| |
Lisa Tucker-Kellogg
Ph.D. 2002
Electrical Engineering and Computer Science
|
Systematic Conformational Search with Constraint Satisfaction
|
| |
Cheuk-san Edward Wang
Ph.D. 2000
Electrical Engineering and Computer Science
|
Determining Molecular Conformation from Distance or Density Data
|
| |
Lukasz A Weber
M.Eng. 2000
|
Generation of Unique Chemical Libraries by Combinatorial Means
|
| |
Xiaona Wei
Singapore-MIT Alliance
|
|
| |
James Weis
M.Sc. 2017
Computational and Systems Biology
|
Artificial intelligence and protein engineering : information theoretical approaches to modeling enzymatic catalysis
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| |
Gareth D White
Technical Assistant
|
|
| |
A Katharina Wilkins
Ph.D. 2008
Chemical Engingeering
|
Sensitivity Analysis of Oscillating Dynamical Systems with Applications to the Mammalian Circadian Clock
|
| |
David Witmer
UROP
Undergraduate Research Opportunity Program
|
|
| |
Aurore Zyto
Ph.D. 2008
Biological Engingeering
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Computational Modeling of Protein-biomolecule Interactions with Applications to Mechanotransduction and Antibody Maturation
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